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[fix]: issue not rendering report without bib files from {journals} #586

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[fix]: issue not rendering report without bib files from {journals} #586

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6 changes: 3 additions & 3 deletions R/create_template.R
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Original file line number Diff line number Diff line change
Expand Up @@ -603,7 +603,7 @@ create_template <- function(
# customize titlepage tex
if (!file.exists(file_dir, "support_files", "_titlepage.tex") | !is.null(species)) create_titlepage_tex(office = office, subdir = supdir, species = species)
# customize in-header tex
if (!file.exists(file_dir, "support_files", "in-header.tex") | !is.null(species)) create_inheader_tex(species = species, year = year, subdir = supdir)
if (!file.exists(file_dir, "support_files", "in-header.tex") | !is.null(species)) create_inheader_tex(species = species, year = year, subdir = supdir, bib_file = bib_file)
}
} else {
#### Copy template files to report folder ----
Expand All @@ -621,7 +621,7 @@ create_template <- function(
# customize titlepage tex
create_titlepage_tex(office = office, subdir = supdir, species = species)
# customize in-header tex
create_inheader_tex(species = species, year = year, subdir = supdir)
create_inheader_tex(species = species, year = year, subdir = supdir, bib_file = bib_file)
# Copy species image from package
file.copy(spp_image, supdir, overwrite = FALSE) |> suppressWarnings()
# Copy us doc logo
Expand Down Expand Up @@ -677,7 +677,7 @@ create_template <- function(
# customize titlepage tex
create_titlepage_tex(office = office, subdir = supdir, species = species)
# customize in-header tex
create_inheader_tex(species = species, year = year, subdir = supdir)
create_inheader_tex(species = species, year = year, subdir = supdir, bib_file = bib_file)
# Copy species image from package
file.copy(spp_image, supdir, overwrite = FALSE) |> suppressWarnings()
# Copy us doc logo
Expand Down
4 changes: 3 additions & 1 deletion R/utils_tex.R
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Original file line number Diff line number Diff line change
Expand Up @@ -64,7 +64,7 @@ create_titlepage_tex <- function(office = "",
#' @return Create an in-header latex document that dynamically changes based on
#' the species and year along with other factors.
#' @export
create_inheader_tex <- function(species = NULL, year = NULL, subdir) {
create_inheader_tex <- function(species = NULL, year = NULL, subdir, bib_file = TRUE) {
if (is.null(year)) {
year <- format(as.POSIXct(Sys.Date(), format = "%YYYY-%mm-%dd"), "%Y")
}
Expand All @@ -73,6 +73,7 @@ create_inheader_tex <- function(species = NULL, year = NULL, subdir) {
)
if (is.null(species)) {
to_add <- paste(
{if (isTRUE(bib_file)) "% Link journals package\n\\usepackage{journals-bibnames}\n\n"},
"\\usepackage[headsepline=0.005pt:,footsepline=0.005pt:,plainfootsepline,automark]{scrlayer-scrpage}", "\n",
"\\clearpairofpagestyles", "\n",
"\\ohead[]{\\headmark} \\cofoot[\\pagemark]{\\pagemark}", "\n",
Expand All @@ -85,6 +86,7 @@ create_inheader_tex <- function(species = NULL, year = NULL, subdir) {
lines <- append(lines, to_add)
} else {
to_add <- paste(
{if (isTRUE(bib_file)) "% Link journals package\n\\usepackage{journals-bibnames}\n\n"},
"\\usepackage[headsepline=0.005pt:,footsepline=0.005pt:,plainfootsepline,automark]{scrlayer-scrpage}", "\n",
"\\clearpairofpagestyles", "\n",
"\\ohead[]{\\headmark} \\cofoot[\\pagemark]{\\pagemark}", "\n",
Expand Down
2 changes: 0 additions & 2 deletions inst/resources/formatting_files/in-header.tex
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Original file line number Diff line number Diff line change
Expand Up @@ -41,5 +41,3 @@
% \addtokomafont{subsection}{\subsectionfont}
% \addtokomafont{subsubsection}{\subsubsectionfont}

% Link journals package
\usepackage{journals-bibnames}
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