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nf-core
seqsubmit
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Fix/update container bam
- #119
#119
Merged
KateSakharova
merged 7 commits into
dev
nf-core/seqsubmit:dev
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fix/update-container-bam
nf-core/seqsubmit:fix/update-container-bam
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Oct 27, 2026
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Fix/update container bam
#119
KateSakharova
merged 7 commits into
dev
nf-core/seqsubmit:dev
from
fix/update-container-bam
nf-core/seqsubmit:fix/update-container-bam
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Commits
Commits on Oct 15, 2026
first draft for bam file as raw read input, uses draft containers and bam tests will currently fail until toolkit containers are updated
Vkale1
committed
63640bf
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Commits on Oct 16, 2026
change test datasets path, symlink read files instead of copy, update docs
Vkale1
committed
16962f7
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Commits on Oct 22, 2026
Merge branch 'dev' into feature/long-read-submission
KateSakharova
authored
d2f952d
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Commits on Oct 26, 2026
update containers with mgnify-toolkit and corresponding tests
KateSakharova
committed
3387b30
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Commits on Oct 27, 2026
add -test upload to validate test
KateSakharova
committed
d028562
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apply wording suggestions
KateSakharova
committed
1f83a81
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add assigned accessions to multiqc and update snapshots
KateSakharova
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8f2b4e6
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