Software
Omics
hypeR (geneset enrichment)
SHINE (Structure Learning for Hiearchical Networks)
Visualization
Networks
Other
Code for Publications
- The β-catenin/CBP/MLL1 axis promotes tumor heterogeneity with stress- and EMT-associated hybrid cell states in head and neck cancer
- A highly resolved integrated transcriptomic atlas of human breast cancers
- A highly resolved integrated single-cell atlas of HPV-negative head and neck cancer
- Metabolomic Signatures of Extreme Old Age: Findings from the New England Centenarian Study
- Dietary Serine Deprivation Impacts H3K27 and H3K4 Methyl Epigenomes to Impede Head and Neck Cancer Cell Plasticity and Tumor Growth
- hypeR-GEM: connecting metabolic signatures to (enzyme-coding) genes via genome-scale metabolic models
- Plasma exosomes from individuals with type 2 diabetes drive breast cancer aggression in patient-derived organoids
- Insulin Resistance Increases TNBC Aggressiveness and Brain Metastasis via Adipocyte-derived Exosomes
- LSD1 Antitumor Immunity
- Total RNA sequencing reveals gene expression and microbial alterations shared by Oral pre-malignant Lesions and Cancer
- Protein signatures of centenarians and their offspring suggest centenarians age slower than other humans
