Issues

• make check_shell always reports success: $(echo $0) is expanded by make, not the shell

  hillerlab/TOGA2#46 · Filter by author richard-burhans opened on Sep 5, 2026

• New install with mamba required manual intervention

  hillerlab/TOGA2#44 · Filter by author KField-Bucknell opened on Aug 12, 2026

• Container def installs unpinned Nextflow; current builds reject TOGA2's own execute_joblist.nf

  hillerlab/TOGA2#42 · Filter by author nekrut opened on Aug 5, 2026
  1

• Exon-level orthology

  hillerlab/TOGA2#40 · Filter by author zkliesmete opened on Jul 20, 2026
  9

• Long distance model?

  hillerlab/TOGA2#28 · Filter by author lauterbur opened on Apr 27, 2026
  7

• Issue with install: Caused by: Cargo metadata failed

  hillerlab/TOGA2#18 · Filter by author foreignsand opened on Feb 13, 2026
  2

• availability on dockerstore

  hillerlab/TOGA2#11 · Filter by author DustinSokolowski opened on Jan 7, 2026
  5