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1. hifimizer hifimizer Public

   Bayesian optimization framework for tuning hifiasm HiFi genome assembly parameters.

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2. mat_gene_exp_evol mat_gene_exp_evol Public

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3. genomics_smk_pipelines genomics_smk_pipelines Public

   Collection of snakemake pipelines I used during genome assemblies.

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4. CNE_PFAR CNE_PFAR Public

   Repository containing scripts used for analysing conserved non-coding elements in the M.opercularis genome.

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5. worm_metabolomics worm_metabolomics Public

   Scripts used for comparing small and big worm metabolomics.

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6. flatworm_genome_methylation flatworm_genome_methylation Public

   Explorations of cytosine methylation in flatworms using PacBio sequencing.

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