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Make WNN the default and redesign Scarf’s documentation workflows - #183

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parashardhapola merged 1 commit into
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Aug 31, 2026
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Make WNN the default and redesign Scarf’s documentation workflows#183
parashardhapola merged 1 commit into
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rebuild_docs

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Reorganizes the documentation around concise RNA, ATAC, and CITE-seq core workflows; adds pinned CELLxGENE rheumatoid-arthritis examples; separates Scanpy and Seurat migration guidance; and moves diagnostics and artifact mechanics into focused advanced pages. Also makes WNN the explicit public default, adds provenance-filtered artifact discovery and modality-weight plotting, refreshes all executed caches, and validates the full suite.

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codecov Bot commented Aug 31, 2026

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Codecov Report

❌ Patch coverage is 84.81013% with 24 lines in your changes missing coverage. Please review.

Files with missing lines Patch % Lines
scarf/plotting/modality_weights.py 82.81% 22 Missing ⚠️
scarf/storage/artifacts.py 92.30% 2 Missing ⚠️

📢 Thoughts on this report? Let us know!

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parashardhapola merged commit 380fe4a into master Aug 31, 2026
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parashardhapola deleted the rebuild_docs branch August 31, 2026 23:03
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