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sunPi/README.md

🔬 Selected Publications

Constitutive inflammation and epithelial-mesenchymal transition dictate sensitivity to nivolumab in CONFIRM: a placebo-controlled, randomised phase III trial Nature Communications, 2025 https://www.nature.com/articles/s41467-025-61691-4

A gut microbiota rheostat forecasts responsiveness to PD-L1 and VEGF blockade in mesothelioma Nature Communications, 2024 https://www.nature.com/articles/s41467-024-49842-5

👋 About Me

I’m a Bioinformatics Scientist specializing in cancer multi-omic analyses, currently working as a Bioinformatics Researcher at the Leicester Cancer Research Centre. Previously, I completed my PhD within the Mesothelioma Research Program, where I focused on immunogenomic mechanisms and pathway-level analyses of tumour evolution.

My interests span RNA-seq, pathway inference (GSEA/PROGENy/ssGSEA), causal modelling, and immunotherapy response prediction.

Outside of research, I love playing music, performing live, and spending time snowboarding.

Popular repositories Loading

  1. sunPi sunPi Public

    Config files for my GitHub profile.

  2. ToRNAdoTeam-SRP ToRNAdoTeam-SRP Public

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  3. ET-DS_via_Ensemble ET-DS_via_Ensemble Public

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  4. grant-code-example grant-code-example Public archive

    This repository represent the example code, that is used as part of the data analysis pipeline. It includes all the functions described in the methods in the manner of data process, train and test.

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  5. DeepCRISPR DeepCRISPR Public

    Forked from bm2-lab/DeepCRISPR

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  6. Study_MiST4 Study_MiST4 Public archive

    Abundance Analysis Pipeline For The Mesothelioma Stratified Therapy Arm 4 (MiST 4) Clinical Study.

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