Issues

• Does PureCLIP work for PAR-CLIP data?

  skrakau/PureCLIP#32 · Filter by author santataRU opened on Jul 14, 2025

• ERROR: Could not learn gamma parameters, exceeded max. number of reseedings!

  skrakau/PureCLIP#31 · Filter by author circR opened on Apr 14, 2025

• Warning: discarding interval on forward strand due to emission probabilities of 0.0 (set to state 'non-enriched + non-crosslink').

  skrakau/PureCLIP#30 · Filter by author Codezy99 opened on Jan 9, 2023

• Error in function boost

  skrakau/PureCLIP#29 · Filter by author panktigosar opened on Oct 25, 2022

• Peaks information

  skrakau/PureCLIP#26 · Filter by author jalalsiddiqui opened on Jan 27, 2021

• how to visualize the bedfile from pureclip using IGV

  skrakau/PureCLIP#25 · Filter by author qicaibiology opened on Nov 22, 2020
  1

• pureclip error in plant's CLIP-Seq

  skrakau/PureCLIP#24 · Filter by author Linhua-Sun opened on Nov 4, 2020

• does pureCLIP support multiple controls?

  skrakau/PureCLIP#23 · Filter by author mparker2 opened on Sep 23, 2020

• ERROR: Could not compute emission probabilities!

  skrakau/PureCLIP#22 · Filter by author tianxiahuihui opened on Sep 7, 2020
  2

• Process killed

  skrakau/PureCLIP#21 · Filter by author skrakau opened on Aug 30, 2020
  4

• Computing CL motif score, WINEXTRACT terminated

  skrakau/PureCLIP#20 · Filter by author algaebrown opened on Aug 14, 2020
  1

• ERROR: Could not compute forward-backward algorithm!

  skrakau/PureCLIP#15 · Filter by author MelaniaAbe opened on May 8, 2020
  4

• pureclip coredumps

  skrakau/PureCLIP#11 · Filter by author riederd opened on Nov 29, 2019
  6