Issues

• Coordinate system BadRead

  bug
  rrwick/Badread#40 · Filter by author TimoD73 opened on Apr 24, 2026
  1

• How to handle PacBio simulated reads before mapping

  rrwick/Badread#31 · Filter by author RDorney opened on Apr 3, 2024
  2

• Documentation on post processing of simulated sequences

  enhancement
  rrwick/Badread#22 · Filter by author ahfitzpa opened on Apr 19, 2023
  1

• High Memory consumption causes computer to freeze

  rrwick/Badread#21 · Filter by author RDorney opened on Feb 15, 2023

• Question about --glitches

  rrwick/Badread#16 · Filter by author riccardo-aiese opened on Jun 17, 2021

• ModuleNotFoundError: No module named 'edlib'

  bug
  rrwick/Badread#15 · Filter by author snayfach opened on Jan 6, 2021
  1

• Organelle genome simulation

  enhancement
  rrwick/Badread#14 · Filter by author huilin-al opened on Oct 6, 2020

• Can we give error percentage while simualting Oxford nanopore long reads

  rrwick/Badread#12 · Filter by author Oieswarya opened on Jul 22, 2020

• What if we could generate two datasets with same reads, one with good quality and one with bad quality?

  enhancement
  rrwick/Badread#11 · Filter by author ginnamon opened on May 8, 2020

• Can chimeras be formed without adapter sequences?

  rrwick/Badread#8 · Filter by author Jonathan-Abrahams opened on Dec 26, 2019

• Multi-threading

  enhancement
  rrwick/Badread#7 · Filter by author baraaorabi opened on Sep 26, 2019
  4