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Declare analysis-workflow and sci-figures as dependencies; release 0.4.2 - #55

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Marius1311 merged 4 commits into
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deps/analysis-workflow
Oct 14, 2026
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Marius1311 merged 4 commits into
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deps/analysis-workflow

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@Marius1311

@Marius1311 Marius1311 commented Oct 13, 2026 •

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The skill runs as an analysis-workflow task ("load it first"), and every run ends with the annotation hierarchy figure, made with the sci-figures skill. So plugin.json now lists both under dependencies. Installing this plugin installs and enables both, and existing users get them on their next update. That includes analysis-workflow's session hooks; sci-figures adds a skill only. Develop now says the dependencies must be installed or loaded with --plugin-dir as well.

The version bump also releases the README-only changes merged since 0.4.1 (#53, #54). .gitignore now lists .claude/worktrees/, as quadbio/claude-plugins#13 asks of every plugin.

Tested: claude plugin validate passes with the new manifest. A throwaway marketplace in which one plugin lists another under dependencies installs and enables both.

🤖 Generated with Claude Code

https://claude.ai/code/session_01Cu5AYoH46bk3rW3qivyPZ5

The skill runs as an analysis-workflow task, so installing this plugin now
installs analysis-workflow too.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
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📝 Code Review ✅ Completed 2026-10-13T18:51:22.052083Z 6d334bc New commits
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💡 Codex Review

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Reviewed commit: 5d97cc6705

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Comment thread .claude-plugin/plugin.json Outdated
},
"homepage": "https://github.com/quadbio/cell-type-annotation",
"license": "MIT",
"dependencies": ["analysis-workflow"],

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P2 Badge Load the dependency in the checkout development command

For a fresh development checkout where analysis-workflow is not already installed, this dependency causes the documented claude --plugin-dir . command in README.md to stop loading the plugin rather than letting the contributor try the skill. The Claude dependency documentation explicitly says that a locally loaded plugin stops loading when its dependency is absent and recommends passing both directories with --plugin-dir; update the development instructions to install the dependency or load both checkouts.

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Fixed in 7fe613a: the Develop line now says analysis-workflow must be installed or loaded with a second --plugin-dir.

Marius1311 and others added 2 commits October 13, 2026 17:50
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Every run ends with the annotation hierarchy figure, made with the
sci-figures skill.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Cu5AYoH46bk3rW3qivyPZ5
@Marius1311 Marius1311 changed the title Declare analysis-workflow as a dependency; release 0.4.2 Declare analysis-workflow and sci-figures as dependencies; release 0.4.2 Oct 13, 2026
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Cu5AYoH46bk3rW3qivyPZ5
@Marius1311
Marius1311 merged commit 9e88450 into main Oct 14, 2026
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@Marius1311
Marius1311 deleted the deps/analysis-workflow branch October 14, 2026 09:39
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