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Plotting issue on cluster. Requesting start_time.txt file #109

Description

@sophiahirakis

Hi team,

There is an issue producing plot output when jobs are running on a server.

The plotting module requests a start_time.txt file

See error below:

data_layout = {'version': 2, 'data_layout': [['/DIR', ['output_data']], ['/FILE_TYPE', ['react_data', 'viz_data']], ['/SEED', [1]]]}
num_runs = 1, data_layout = {'version': 2, 'data_layout': [['/DIR', ['output_data'], 0], ['/FILE_TYPE', ['react_data', 'viz_data'], 0], ['/SEED', [1], 0]]}
Preparing run 0
Counters = /SEED:0 /FILE_TYPE:0 /DIR:0
Run path = output_data/react_data
Parameter Point for run is:
glob of /home/shirakis/projects/Dyad/sims/sim_files/D_b_p_f_R_S_L-6-n_files/mcell/output_data/react_data/seed_*/Ca2_cyt.World.dat
Traceback (most recent call last):
File "/nadata/snl/lv_home/cnl/shirakis/bin/blender_2.79/2.79/scripts/addons/cellblender/cellblender_reaction_output.py", line 404, in execute
start_time = os.stat(os.path.join(project_files_path(), "start_time.txt")).st_mtime
FileNotFoundError: [Errno 2] No such file or directory: '/home/shirakis/projects/Dyad/sims/sim_files/D_b_p_f_R_S_L-6-n_files/start_time.txt'

location: :-1

location: :-1

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