PIPE

Collection of scripts used for research project

Protein Files

• protien_pairs.txt - Contains list of 14k protein-protein interactions of interest
• protein_list.txt - Alpha ordered list of all proteins contained in interactions list (protein_pairs.txt)
• ProteinPfam - list of proteins and associated pfam domains
• interactingDomainPair.txt - list of all interacting domains (obtained from 3did)
• 3did_flat - flat files downloadable from 3did which contain the core information of 3did
• ProteinLength.txt - list of length of proteins (same info found in length.txt)
• DomainLength.txt - list of length of domains (same info found in length.txt)
• length.txt - list of domain location in associated protein