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NoModuleFoundError 'seqpy'

Status: Open.

#29 In liaoherui/StrainScan;

· enzovalentino opened on Jan 23, 2026

the detail steps of StrainScan

Status: Open.

#28 In liaoherui/StrainScan;

· chaoyanggu opened on Jul 1, 2025

Issue with StrainScan_build of building a database using approximately 200 genomes

Status: Open.

#26 In liaoherui/StrainScan;

· zhangdan0 opened on May 20, 2025

k-mer error while running strainscan

Status: Open.

#25 In liaoherui/StrainScan;

· AK-25FL opened on Feb 7, 2025

strainscan_build failing due to hclsMap_95.txt file having extra lines

Status: Open.

#24 In liaoherui/StrainScan;

· kheber opened on Sep 21, 2024

Which column of final_report.txt should be used for strain abundance?

Status: Open.

#23 In liaoherui/StrainScan;

· haihao999 opened on Sep 18, 2024

use a custom database to identify strains give IndexError: list index out of range

Status: Open.

#21 In liaoherui/StrainScan;

· wsyjh opened on Mar 31, 2024

数据库构建 killed

Status: Open.

#20 In liaoherui/StrainScan;

· wll4213 opened on Mar 15, 2024

Genomes used to build the database

Status: Open.

#19 In liaoherui/StrainScan;

· zwh82 opened on Feb 6, 2024

Issue with StrainScan_build during database construction

Status: Open.

#18 In liaoherui/StrainScan;

· BZhao95 opened on Jan 29, 2024

How to infer different species-level abundances based on strain-level abundances

Status: Open.

#17 In liaoherui/StrainScan;

· xujialupaoli opened on Jan 27, 2024

How to create custom databases

Status: Open.

#11 In liaoherui/StrainScan;

· NamenloseHeldin opened on Oct 6, 2023