Skip to content

Spoa upgrade - #81

Draft
tbrekalo wants to merge 8 commits into
masterfrom
spoa-upgrade
Draft

Spoa upgrade#81
tbrekalo wants to merge 8 commits into
masterfrom
spoa-upgrade

Conversation

@tbrekalo

Copy link
Copy Markdown

Descriptions

The aim of this PR is to improve racon performance with the new SPOA version which takes into a count node coverage when calculating the consensus. For more information see:

Tasks

  • upgrade to c++17 to allow support for newer SPOA versions

    • upgrade CMake
    • upgrade meson
    • upgrade ci scripts
  • upgrade SPOA version

    • CMake
    • git submodules for meson
  • utilize min_coverage

    • add command line argument
    • add min_coverage parameter to polisher and use it for consensus generation

    Results

  • TODO

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant