All pull requests

Pull requests

• steady state: take a run test the closed form cannot take once more on differences (#1357)

  #1370·Montana opened Oct 28, 2026Contributor·

  ·
  1

• ode: leave a rule-set parameter at its end-of-run value after a compiled warm run (#1358)

  #1359·Montana opened Oct 28, 2026Contributor·

  ·
  1

• sens: read a row ahead from short of the sample, and fire what crosses there (#1276)

  #1356·Montana opened Oct 28, 2026Contributor·

  ·
  1

• events: refuse a fixed fire and a moving one on one instant across two batches (#1277)

  #1353·Montana opened Oct 28, 2026Contributor·

  ·
  1

  1

• tests: pin the steady state the two unmended quotients reach from a jump; warn on another SUNDIALS (#1335)

  #1352·Montana opened Oct 28, 2026Contributor·

  ·
  1

• sbml: refuse a ring of sizes through a value and a jump condition (#1185)

  #1351·Montana opened Oct 28, 2026Contributor·

  ·
  1

• tests: declare what a forced-JIT run cannot pass, so the run is a signal (#1217)

  #1350·Montana opened Oct 28, 2026Contributor·

  ·
  1

• deps: lock antimony 3.2.1 and libroadrunner 2.11.0, with the evaluation (#1288)

  #1349·Montana opened Oct 28, 2026Contributor·

  ·

• codegen: write C for what ExprTk means, or decline before compiling (#1212)

  #1348·Montana opened Oct 28, 2026Contributor·

  ·
  1

• parity: a RoadRunner-Gillespie ensemble stops at its wall budget inside a replicate (#1288, part 1)

  #1347·Montana opened Oct 28, 2026Contributor·

  ·

• ode: read a slot negative by less than its atol as 0 on the non-finite retry (#1340)

  #1346·Montana opened Oct 28, 2026Contributor·

  ·
  1

• net writer: warn when a rule species is written so only bngsim reads it as meant (#1274)

  #1345·Montana opened Oct 28, 2026Contributor·

  ·
  1

• mir: pad loop heads with NOPs Rosetta 2 can run (#1216)

  #1344·elyfmiller opened Oct 27, 2026Collaborator·

  ·
  1

• sens: read a row where the run stands when CVODES returns tout from a step that does not span it (#1301)

  #1343·Montana opened Oct 27, 2026Contributor·

  ·
  1

• Typed refusals: SparseJacobianUnavailableError and CodegenDeclinedError (#1313)

  #1336·Montana opened Oct 27, 2026Contributor·

  ·
  1

• nfsim: a load leaves the process's working directory alone, and a failed one names the file (#1314)

  #1334·Montana opened Oct 27, 2026Contributor·

  ·
  1

• cvode: read the restart test's band from the error weights, in quadrature (#907)

  #1329·elyfmiller opened Oct 27, 2026Collaborator·

  ·

• mir: reserve 32 MB of address space per context for its code, not 128 (#1215)

  #1327·elyfmiller opened Oct 27, 2026Collaborator·

  ·
  1

• events: run a strict trigger after its non-strict twin on a crossing (#947)

  #1326·elyfmiller opened Oct 27, 2026Collaborator·

  ·
  1

• ssa_screen: let a recording past the cap save RoadRunner's result (#1290 follow-up)

  #1325·wshlavacek opened Oct 27, 2026Collaborator·

  ·

• differential: NFsim against RuleMonkey in distribution (#1312)

  #1323·Montana opened Oct 27, 2026Contributor·

  ·
  1

• differential: compiled SSA propensities against the interpreter (#1310)

  #1322·Montana opened Oct 27, 2026Contributor·

  ·
  1

• differential: steady_state() against a run to equilibrium (#1311)

  #1320·Montana opened Oct 27, 2026Contributor·

  ·
  1

• differential: attribute each DIFF with third arms, and mark contested models (#1309)

  #1319·Montana opened Oct 27, 2026Contributor·

  ·
  1

• differential: state-leak checks, restart, reuse and batch (#1307)

  #1318·Montana opened Oct 27, 2026Contributor·

  ·
  1