Conversation
Points to the canonical skill in PanGBank-api and records what the notebooks do not spell out: ppanggolin metadata rewrites the HDF5 in place, and re-running a --download into a directory holding an annotated pangenome deletes it.
The rate limit was stated in the skill and in llms.txt but not here, so an agent working in this repository — the population AGENTS.md actually serves — never saw it. PanGBank runs on a shared Genoscope machine with no dedicated resources and no monitoring, so an overload is invisible until the service goes down for everyone.
The rule read "shared Genoscope machine with no dedicated resources and no monitoring". Stating in a public, agent-facing file that nothing is watched tells a bad actor exactly what goes unnoticed, and it undersells the resource to legitimate users. The constraint keeps all of its force from the part that matters: the infrastructure is shared, so an overload degrades the service for everyone else.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
No description provided.