Kihara Protein Bioinformatics Laboratory

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1. ACC-UNet ACC-UNet Public

   ACC-UNet is A Completely Convolutional UNet model inspired from transformer-based UNets

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2. GNN_DOVE GNN_DOVE Public

   Code for "Protein Docking Model Evaluation by Graph Neural Networks"

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3. DiffModeler DiffModeler Public

   DiffModeler: a diffusion model based protein complex structure modeling tool.

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4. DOVE DOVE Public

   A Deep-learning based dOcking decoy eValuation mEthod

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5. NuFold NuFold Public

   NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation

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6. CryoREAD CryoREAD Public

   CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.

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