Issues

• Use of dmrseq with only one sample per condition/using Pacbio data

  kdkorthauer/dmrseq#77 · Filter by author epigenomepostdoc opened on Jul 10, 2026
  2

• Exact number of permutations

  kdkorthauer/dmrseq#76 · Filter by author npaisaca opened on May 11, 2026

• Considerations for targeted capture data

  kdkorthauer/dmrseq#75 · Filter by author mmccorkindale opened on Mar 10, 2026

• Big FDR values for 42 sample

  kdkorthauer/dmrseq#74 · Filter by author AndreaPeC opened on Jul 9, 2025
  3

• Rbind error during permutations

  kdkorthauer/dmrseq#72 · Filter by author plbngl opened on Apr 22, 2025
  1

• Computing considerations for large data set

  kdkorthauer/dmrseq#70 · Filter by author victoriaserelli opened on Feb 28, 2025
  4

• Comparing conditions were altered when including adjustCovariate for some covariates

  bug
  kdkorthauer/dmrseq#69 · Filter by author MinhTTNguyen opened on Feb 22, 2025
  6

• Loading samples in new R takes too long time

  kdkorthauer/dmrseq#68 · Filter by author desmodus1984 opened on Sep 21, 2024
  1

• Running block=TRUE crashes during permutations with "Error in .start_as_unnamed_integer(start)"

  kdkorthauer/dmrseq#64 · Filter by author mpiersonsmela opened on Jan 19, 2024
  8

• Changing y axis limits in plotDMRs

  enhancement
  kdkorthauer/dmrseq#48 · Filter by author hernandezvargash opened on Apr 8, 2022
  2

• Duration of a permutation longer than previous one

  kdkorthauer/dmrseq#42 · Filter by author tmms1 opened on Mar 11, 2021
  3

• Error when running dmrseq function and question about generating PCA

  kdkorthauer/dmrseq#38 · Filter by author amjass12 opened on Jan 21, 2020
  3

• What are the suitable parameters for RRBS data?

  question
  kdkorthauer/dmrseq#14 · Filter by author bishwaG opened on Aug 28, 2018
  6