Issues

• New user exon_stitching.sh

  juliema/exon_stitching#19 · Filter by author Ofsm opened on Jul 10, 2020
  3

• some taxa are printed out twice, one is always blank

  juliema/exon_stitching#17 · Filter by author juliema opened on Aug 24, 2018
  1

• check NNN + Stop codon issue

  juliema/exon_stitching#16 · Filter by author juliema opened on Nov 13, 2017

• possibly long sequenes.. check

  juliema/exon_stitching#15 · Filter by author juliema opened on Nov 13, 2017

• typing the header over and over bug

  juliema/exon_stitching#14 · Filter by author juliema opened on Nov 13, 2017

• test output if no exon is found

  juliema/exon_stitching#13 · Filter by author juliema opened on Nov 11, 2017

• add in optional output directory path and name

  juliema/exon_stitching#12 · Filter by author juliema opened on Nov 3, 2017

• add script to take all contigs from the highest iteration number from aTRAM output

  juliema/exon_stitching#11 · Filter by author juliema opened on Nov 3, 2017

• add in changing the genetic code as an option

  enhancement
  juliema/exon_stitching#10 · Filter by author juliema opened on Nov 3, 2017
  

• remove overlapping pieces and stitch the overlapped contigs together

  enhancement
  juliema/exon_stitching#9 · Filter by author juliema opened on Nov 3, 2017
  1

  

• make overlap and optional parameter with zero as the default

  juliema/exon_stitching#8 · Filter by author juliema opened on Nov 3, 2017
  

• test suite for selective stitching

  juliema/exon_stitching#6 · Filter by author juliema opened on Nov 2, 2017

• make an option for selective exon stitching

  juliema/exon_stitching#5 · Filter by author juliema opened on Nov 2, 2017

• make debug and optional command

  juliema/exon_stitching#4 · Filter by author juliema opened on Nov 2, 2017

• merge branches

  juliema/exon_stitching#3 · Filter by author juliema opened on Nov 2, 2017

• check for underscores in names

  juliema/exon_stitching#2 · Filter by author juliema opened on Aug 25, 2017
  

• Add testing suite

  juliema/exon_stitching#1 · Filter by author juliema opened on Mar 6, 2017