Issues

• DNAmAge(fastImp = TRUE) fails with "object 'cpgs.in' not found" whenever any clock CpG is missing

  isglobal-brge/methylclock#42 · Filter by author zeynepcoskun687 opened on Jul 23, 2026

• Browser-freezing Issue on the Reference page of the github.io website

  isglobal-brge/methylclock#41 · Filter by author joshua-zhang-lilly opened on May 29, 2026

• Should batch correction be performed before calculating methylation age using this package?

  isglobal-brge/methylclock#40 · Filter by author YichenTao opened on Apr 20, 2026
  3

• Incorrect predAge warning message: "The number of missing CpGs .. exceeds 80%."

  isglobal-brge/methylclock#39 · Filter by author friedav opened on Mar 25, 2026
  4

• Change in DNAmAge calculation in the same dataset

  isglobal-brge/methylclock#38 · Filter by author Kreddy2046 opened on Oct 11, 2025

• does DNAmAge function assume chronological age?

  isglobal-brge/methylclock#37 · Filter by author AnmolAPardeshi opened on Sep 18, 2025

• plotDNAmAge error

  isglobal-brge/methylclock#36 · Filter by author DanielEWeeks opened on Jul 8, 2025

• Underestimated DNAmAge for skinHorvath and Hannum Clocks

  isglobal-brge/methylclock#35 · Filter by author vylyny opened on May 21, 2024

• Bug with DNAmAge when using the age argument

  isglobal-brge/methylclock#34 · Filter by author Pierre9344 opened on May 11, 2024
  1

• Error in using DNAmAge

  isglobal-brge/methylclock#32 · Filter by author SchunNoona opened on Feb 8, 2024
  1

• Error when run DNAmAge

  isglobal-brge/methylclock#30 · Filter by author alex46015 opened on Dec 6, 2023

• Convert the Bisulfite Methylseq data to beta values or M-values for Methylclock analysis

  isglobal-brge/methylclock#29 · Filter by author darshandhakan opened on Nov 27, 2023

• Error adjusting for cell counts in DNAmAge()

  isglobal-brge/methylclock#28 · Filter by author cewim opened on Oct 19, 2023

• Negative DNAm PhenoAge values when using Levine's clock _513 CpGs

  isglobal-brge/methylclock#27 · Filter by author Chenjiani1112 opened on May 14, 2023
  1

• Wu age calculation

  isglobal-brge/methylclock#26 · Filter by author annebozack opened on May 2, 2023
  1

• checkClocksGA() returns missing_CpGs for Cpgs_in_clock (Bohlin)

  isglobal-brge/methylclock#25 · Filter by author ptodtenhaupt opened on Mar 23, 2023
  3

• How to use MthylClock using Bed9+ file from WGBS as input

  isglobal-brge/methylclock#22 · Filter by author tawfikyoussef opened on Aug 8, 2022
  1

• Request adding new clocks

  isglobal-brge/methylclock#18 · Filter by author reemelkabbout opened on Apr 1, 2022

• Issue with normalization

  isglobal-brge/methylclock#17 · Filter by author annebozack opened on Mar 25, 2022
  5

• Error while computing age acceleration

  isglobal-brge/methylclock#15 · Filter by author reemelkabbout opened on Feb 16, 2022
  4

• adding clocks

  isglobal-brge/methylclock#7 · Filter by author perishky opened on May 12, 2021
  2