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feat(registry): prioritize Bun > Deno/pnpm > npm/yarn across MCP manifest, scripts, and publish CI - #366

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hyperpolymath merged 2 commits into
mainfrom
arena/b1622b57-boj-server
Oct 18, 2026
Merged

hyperpolymath merged 2 commits into
mainfrom
arena/b1622b57-boj-server

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Summary

Aligns boj-server's MCP Registry manifest, local MCP configuration, package scripts, container entrypoints, and release publishing workflow with the runtime priority order Bun first → Deno / pnpm second → npm / yarn last.

Refs #188

Changes

  • server.json:
    • Sets packages[0].runtimeHint to "bunx" (replacing "npx") so MCP Registry clients launch @hyperpolymath/boj-server via Bun first.
    • Adds _meta["io.modelcontextprotocol.registry/publisher-provided"]["io.github.hyperpolymath"] documenting runtimePreference: ["bunx", "deno", "pnpm", "npx", "yarn"] and jsrPackage: "jsr:@hyperpolymath/boj-server".
    • Keeps registryType: "npm" and registryBaseUrl: "https://registry.npmjs.org" because the official MCP Registry validator (modelcontextprotocol/registry ValidatePackage) only accepts npm (https://registry.npmjs.org), pypi, nuget, oci, mcpb, or cargo as backing package registries, and bun publish / bunx use https://registry.npmjs.org as their package registry.
  • .github/workflows/publish.yml & .github/workflows/actions.lock:
    • Replaces actions/setup-node@v4.4.0, node -p, and npm publish with oven-sh/setup-bun@v2.2.0, bun -e manifest checks (including runtimeHint == 'bunx'), and bun publish --access public (NPM_CONFIG_TOKEN), followed by the publish-jsr job (denoland/setup-deno@v2.0.4 + deno publish).
    • Updates .github/workflows/actions.lock under .github/workflows/publish.yml to lock oven-sh/setup-bun@v2.2.0.
  • .mcp.json:
    • Switches local MCP client command from npx -y @hyperpolymath/boj-server@latest to bunx @hyperpolymath/boj-server@latest.
  • package.json:
    • Updates start and test scripts to prefer bun first, fall back to deno second, and fall back to node last, alongside explicit :bun, :deno, and :node script variants and engines.bun: ">=1.0.0".
  • Containerfile & container/Containerfile.mcp-bridge:
    • Sets container ENTRYPOINT to bun (/usr/local/bin/bun mcp-bridge/main.js and bun /app/mcp-bridge/main.js).
  • mcp-bridge/lib/runtime.js, mcp-bridge/main.js, .github/workflows/e2e.yml, mcp-bridge/tests/dispatch_test.js:
    • Exports isBun in runtime.js, orders the E2E bridge-tests matrix as bun → deno → node, and asserts runtimeHint === "bunx" in dispatch_test.js.

RSR Quality Checklist

Required

  • Tests pass (just test or equivalent)
  • Code is formatted (just fmt or equivalent)
  • Linter is clean (no new warnings or errors)
  • No banned language patterns (no TypeScript, no npm/bun, no Go/Python)
  • No unsafe blocks without // SAFETY: comments
  • No banned functions (believe_me, unsafeCoerce, Obj.magic, Admitted, sorry)
  • SPDX license headers present on all new/modified source files
  • No secrets, credentials, or .env files included

As Applicable

  • .machine_readable/STATE.a2ml updated (if project state changed)
  • .machine_readable/ECOSYSTEM.a2ml updated (if integrations changed)
  • .machine_readable/META.a2ml updated (if architectural decisions changed)
  • Documentation updated for user-facing changes
  • TOPOLOGY.md updated (if architecture changed)
  • CHANGELOG or release notes updated
  • New dependencies reviewed for license compatibility (MPL-2.0 / MPL-2.0)
  • ABI/FFI changes validated (src/abi/ and ffi/zig/ consistent)

Testing

  • bun test mcp-bridge/tests/dispatch_test.js mcp-bridge/tests/routing_args_test.js mcp-bridge/tests/declared_args_test.js: 174/174 pass.
  • deno test --allow-read --allow-env --allow-run --allow-net mcp-bridge/tests/dispatch_test.js mcp-bridge/tests/routing_args_test.js mcp-bridge/tests/declared_args_test.js: 174/174 pass.
  • node --test mcp-bridge/tests/dispatch_test.js mcp-bridge/tests/routing_args_test.js mcp-bridge/tests/declared_args_test.js: 174/174 pass.
  • node mcp-bridge/tests/boot_smoke.js under bun, deno, and node: all 3 pass (68 tools advertised, exit=0).
  • NPM_CONFIG_TOKEN=dummy_token bun publish --dry-run --access public: verified packument and 32 included files.

Screenshots

Not applicable (manifest, runtime configuration, container entrypoint, and CI workflow changes only).

…fest, scripts, and publish CI

Co-authored-by: arena-agent <297053741+arena-agent@users.noreply.github.com>
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Codex Review Summary

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📝 Code Review ⚠️ Failed 2026-10-18T16:42:07.975351Z be9f830 PR opened
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📥 Commits

Reviewing files that changed from the base of the PR and between 5ab45af and 650e99e.

⛔ Files ignored due to path filters: 1
  • .github/workflows/actions.lock is excluded by !**/*.lock
📒 Files selected for processing: 10
  • .github/workflows/e2e.yml
  • .github/workflows/publish.yml
  • .mcp.json
  • Containerfile
  • container/Containerfile.mcp-bridge
  • mcp-bridge/lib/runtime.js
  • mcp-bridge/main.js
  • mcp-bridge/tests/dispatch_test.js
  • package.json
  • server.json
  • Autofix · Keep fixing CodeRabbit findings and required CI, and resolving merge conflicts

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@github-actions

github-actions Bot commented Oct 18, 2026 •

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🏁 path-claims bench

Commit bad2702

Numbers
path-claims bench  (node v22.23.3)

  scenario                                              iters       ms        ns/op          ops/s
  --------------------------------------------------------------------------------------------------------------
  register: 10 active claims, 3 new paths               50000 iters    182 ms      3.65 µs/op    274.0k ops/s
  register: 100 active claims, 3 new paths              20000 iters    320 ms     16.02 µs/op     62.4k ops/s
  register: 1000 active claims, 3 new paths              5000 iters    941 ms    188.35 µs/op      5.3k ops/s
  register: 100 active claims, 20 new paths              5000 iters    392 ms     78.55 µs/op     12.7k ops/s

  pathsOverlap: deep diverge at segment 4             1000000 iters    158 ms     158.3 ns/op     6.32M ops/s
  pathsOverlap: short prefix match                    1000000 iters    133 ms     134.0 ns/op     7.47M ops/s

  refresh (existing claim)                             100000 iters     12 ms     122.2 ns/op     8.18M ops/s
  list (100 active claims)                              50000 iters    273 ms      5.47 µs/op    182.7k ops/s

  (Bench numbers depend on host; use deltas across commits, not absolute values.)

Host-dependent — compare deltas across commits, not absolute values.

Comment thread .github/workflows/publish.yml Fixed
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🔍 Hypatia Security Scan

Findings: 99 issues detected

Severity Count
🔴 Critical 10
🟠 High 18
🟡 Medium 71

⚠️ Action Required: Critical security issues found!

View findings
[
  {
    "reason": "Job `triage` in label-triage.yml has no `timeout-minutes:` declaration. Default is 6 hours — a stuck codeload fetch or runner hang can burn budget. Add `timeout-minutes: 10` (or proportional).",
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  {
    "reason": "Step uses `peter-evans/repository-dispatch` with `token: ${{ secrets.FARM_DISPATCH_TOKEN }}` but has no `if: secrets.FARM_DISPATCH_TOKEN != ''` gate. On repos where the secret hasn't been propagated the action fails on every push, red-maining the repo. Add the step-level gate (or env+if pattern) so the missing-secret path is a clean skip instead of a red.",
    "type": "secret_action_without_presence_gate",
    "file": ".github/workflows/instant-sync.yml",
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  {
    "reason": "codeql.yml does not list `language: actions` in its matrix, but the repo has workflow files. CodeQL's `actions` language scans workflow YAML for injection and other CI/CD-specific weaknesses — every repo with workflows benefits. Add an entry to `matrix.include` with `language: actions` + `build-mode: none`.",
    "type": "codeql_missing_actions_language",
    "file": ".github/workflows/codeql.yml",
    "level": "epi",
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    "type": "RE001",
    "file": ".github/workflows/labels.yml",
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    "file": ".github/workflows/push-email-notify.yml",
    "level": "epi",
    "action": "report",
    "rule_module": "research_extensions",
    "severity": "medium",
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    "line": 37,
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    "type": "RE001",
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    "level": "epi",
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    "line": 44,
    "reason": "job in .github/workflows/container-publish.yml references `secrets.*` but does not install `step-security/harden-runner` — review outbound-egress monitoring",
    "type": "RE001",
    "file": ".github/workflows/container-publish.yml",
    "level": "epi",
    "action": "report",
    "rule_module": "research_extensions",
    "severity": "medium",
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    "level": "epi",
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    "rule_module": "research_extensions",
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]

Powered by Hypatia Neurosymbolic CI/CD Intelligence

Co-authored-by: arena-agent <297053741+arena-agent@users.noreply.github.com>
@github-actions

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🔍 Hypatia Security Scan

Findings: 99 issues detected

Severity Count
🔴 Critical 10
🟠 High 18
🟡 Medium 71

⚠️ Action Required: Critical security issues found!

View findings
[
  {
    "reason": "Job `triage` in label-triage.yml has no `timeout-minutes:` declaration. Default is 6 hours — a stuck codeload fetch or runner hang can burn budget. Add `timeout-minutes: 10` (or proportional).",
    "type": "missing_timeout_minutes",
    "file": ".github/workflows/label-triage.yml",
    "level": "epi",
    "action": "flag",
    "rule_module": "workflow_audit",
    "severity": "medium",
    "recipe_id": "recipe-add-workflow-timeout-minutes",
    "job": "triage",
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    "support": {
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  },
  {
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    "file": ".github/workflows/labels.yml",
    "level": "epi",
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  },
  {
    "reason": "Job `deploy` in pages-deploy.yml has no `timeout-minutes:` declaration. Default is 6 hours — a stuck codeload fetch or runner hang can burn budget. Add `timeout-minutes: 10` (or proportional).",
    "type": "missing_timeout_minutes",
    "file": ".github/workflows/pages-deploy.yml",
    "level": "epi",
    "action": "flag",
    "rule_module": "workflow_audit",
    "severity": "medium",
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    "job": "deploy",
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        "observations": 1,
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    "support": {
      "kind": "pattern"
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  },
  {
    "reason": "Step uses `peter-evans/repository-dispatch` with `token: ${{ secrets.FARM_DISPATCH_TOKEN }}` but has no `if: secrets.FARM_DISPATCH_TOKEN != ''` gate. On repos where the secret hasn't been propagated the action fails on every push, red-maining the repo. Add the step-level gate (or env+if pattern) so the missing-secret path is a clean skip instead of a red.",
    "type": "secret_action_without_presence_gate",
    "file": ".github/workflows/instant-sync.yml",
    "level": "epi",
    "action": "peter-evans/repository-dispatch",
    "rule_module": "workflow_audit",
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    "evidence": [
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  },
  {
    "reason": "codeql.yml does not list `language: actions` in its matrix, but the repo has workflow files. CodeQL's `actions` language scans workflow YAML for injection and other CI/CD-specific weaknesses — every repo with workflows benefits. Add an entry to `matrix.include` with `language: actions` + `build-mode: none`.",
    "type": "codeql_missing_actions_language",
    "file": ".github/workflows/codeql.yml",
    "level": "epi",
    "action": "flag",
    "rule_module": "workflow_audit",
    "severity": "medium",
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    "action": "report",
    "rule_module": "research_extensions",
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    "line": 37,
    "reason": "job in .github/workflows/build.yml references `secrets.*` but does not install `step-security/harden-runner` — review outbound-egress monitoring",
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    "file": ".github/workflows/build.yml",
    "level": "epi",
    "action": "report",
    "rule_module": "research_extensions",
    "severity": "medium",
    "evidence": [
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    "type": "RE001",
    "file": ".github/workflows/container-publish.yml",
    "level": "epi",
    "action": "report",
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  {
    "line": 158,
    "reason": "job in .github/workflows/release.yml references `secrets.*` but does not install `step-security/harden-runner` — review outbound-egress monitoring",
    "type": "RE001",
    "file": ".github/workflows/release.yml",
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    "evidence": [
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]

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@hyperpolymath
hyperpolymath merged commit c0d8b8a into main Oct 18, 2026
61 of 64 checks passed
@hyperpolymath
hyperpolymath deleted the arena/b1622b57-boj-server branch October 18, 2026 17:01
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