health data science unit
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Repositories
- hdsu-bioquant.github.io Public
- decoupling_rigi_ifn Public
This repository provides the scripts to reproduce the bioinformatics analysis, plots and results in the manuscript "Decoupling RIG-I and IFNR Signaling Reveals Heterogeneous Antiviral Sensing States with Clinical Relevance". We describe an approach to disentangle RIG-I vs IFN downstream signaling.
- Hi-C-Pipeline Public
- prcc-treat-rnaseq Public
Unified, containerized RNA-seq processing workflow for the pRCC-TREAT consortium, supporting full-length paired-end and QuantSeq 3′ single-end RNA-seq with optional UMI handling.
- scRNASeq-coreCD8Tcells Public
Single Cell Analysis of HBV specific CD8 T Exhausted cells from chronically infected mice and evaluation of the restoration of functional phenotypes after Poli IC TLR3 agonist treatment.
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