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harvardinformatics
scRNAseq-preprocessing
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Simplify dev
- #11
#11
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adamfreedman
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harvardinformatics/scRNAseq-preprocessing:main
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harvardinformatics/scRNAseq-preprocessing:simplify_dev
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Jul 17, 2026
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Simplify dev
#11
adamfreedman
merged 3 commits into
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harvardinformatics/scRNAseq-preprocessing:main
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simplify_dev
harvardinformatics/scRNAseq-preprocessing:simplify_dev
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Commits on Jul 16, 2026
Simplify: dedup test helpers, tighten SCTransform call, sparse jitter, hoist invariant loop work
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Fix percent.mt corruption and reintroduced duplicate cells in medium fixture generator
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Make medium-fixture de-dup injective (occurrence-rank rows) and vectorize the bump
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