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1. EI-CoreBioinformatics/mikado EI-CoreBioinformatics/mikado Public

   Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

   Python 116 20

2. EI-CoreBioinformatics/minos EI-CoreBioinformatics/minos Public

   The labyrinth king judges your gene models.

   Python 10

3. EI-CoreBioinformatics/reat EI-CoreBioinformatics/reat Public

   Robust Eukaryotic Annotation Toolkit

   Python 18 3

4. EI-CoreBioinformatics/portcullis EI-CoreBioinformatics/portcullis Public

   Splice junction analysis and filtering from BAM files

   C++ 44 9

5. EI-CoreBioinformatics/eirepeat EI-CoreBioinformatics/eirepeat Public

   eirepeat - EI Repeat Identification pipeline

   Python 7 2

6. EI-CoreBioinformatics/eifunannot EI-CoreBioinformatics/eifunannot Public

   eifunannot - EI AHRD functional annotation pipeline

   Python 1