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Release update - #259

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cophus wants to merge 420 commits into
mainfrom
dev
Closed

Release update#259
cophus wants to merge 420 commits into
mainfrom
dev

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@cophus

@cophus cophus commented Jul 9, 2026

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cedriclim1 and others added 30 commits March 4, 2026 20:00
move tagging and release to deploy action
…ion, constructors, define_lattice() and AutoSerialize implementation.
cedriclim1 and others added 28 commits May 28, 2026 17:36
…nted is not truly PPLR and was brittle. Will talk to @arthurmccray 5/28/2026 about this
Per-parameter Learning Rate (PPLR) Implementation, Tensor Decomposition Models, and Tomography Updates
step_optimizers and zero_grad_all looped over optimizer_params and stepped
both the object and pose optimizers on every pass, so with pose optimization
enabled each optimizer took two Adam steps per batch. Gate by key, matching
step_schedulers.

Also:
- pass num_iter to set_schedulers on the reset_dset path so cosine/linear/
  exponential schedulers get a valid T_max
- scheduler_params setter no longer mutates the caller's dict
- drop the non-existent tv_plane key from ObjINRConstraints.soft_constraint_keys
  (it crashed Constraints.__str__)
- ObjectPixelated.get_tv_loss now takes TV over the trailing spatial dims, so it
  handles a 3D volume, obj_view's [1, D, H, W], and a multimodal [C, D, H, W]
- remove an unreachable duplicate branch in TomographyINRDataset.forward
- align iradon_torch's default theta with radon_torch / scikit-image (endpoint
  excluded)

Add regression tests covering each fix.
Fix latent bugs in tomography optimizer wiring, constraints, and radon
Normalizing by the quantile now an option in Tomo Dataset
…er than comparing the shapes within the tilt series stack.
@quantem-bot

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This pull request has been automatically closed because the submitted version 0.1.8 matches the current version on main.

🔄 A patch bump has been created and submitted as a new pull request:

➡️ release/0.1.9

Please review and merge as appropriate.

@quantem-bot quantem-bot closed this Jul 9, 2026
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10 participants