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Add some CTVsuggest packages - #48

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Add some CTVsuggest packages#48
willgearty wants to merge 2 commits into
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willgearty-patch-1

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Adds some of the new CTVsuggest suggestions (see #9).

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willgearty requested a review from ms609 July 21, 2026 21:45
Comment thread Phylogenetics.md Outdated
- `r pkg("mvMORPH")` can fit Brownian motion, early burst, ACDC, OU, and shift models to univariate or multivariate data.
- `r github("gilles-didier/cauphy")` models trait distribution using the Cauchy Process.
- `r pkg("geiger")`, `r pkg("motmot")`, `r pkg("ouch")`, `r pkg("slouch")`, `r pkg("surface")`, and `r pkg("OUwie")` can be used to fit Ornstein-Uhlenbeck (OU) models. `r pkg("ouch")` and `r pkg("slouch")` can implement models with multiple means, `r pkg("surface")` can implement models with multiple means using stepwise AIC, `r pkg("slouch")` can implement models with continuous covariates, and `r pkg("OUwie")` can implement models with multiple means, rates, and attraction values. Also see `r github("mongiardino/extendedSurface")` which combines the functionality of `r pkg("surface")` and `r pkg("OUwie")`.
- `r pkg("geiger")`, `r pkg("motmot")`, `r pkg("ouch")`, `r pkg("slouch")`, `r pkg("surface")`, `r pkg("bayou")`, and `r pkg("OUwie")` can be used to fit Ornstein-Uhlenbeck (OU) models. `r pkg("ouch")` and `r pkg("slouch")` can implement models with multiple means, `r pkg("surface")` can implement models with multiple means using stepwise AIC, `r pkg("bayou")` can implement models with multiple means using Bayesian reversible-jump methods (see Uyeda and Harmon 2014), `r pkg("slouch")` can implement models with continuous covariates, `r pkg("OUwie")` can implement models with multiple means, rates, and attraction values, and `r pkg("bayou")` . Also see `r github("mongiardino/extendedSurface")` which combines the functionality of `r pkg("surface")` and `r pkg("OUwie")`.

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, and r pkg("bayou") .

seems like an incomplete sentence?

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Fixed, thanks!

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