FAQ

Use this alias:

git config --global alias.cleanx 'clean -x -e .git-sym'

Add a post-checkout script as .git/hooks/post-checkout:

#!/bin/sh
exec git sym -v update

Because you have core.symlinks = false in your ~/.gitconfig

Possibly you deleted a symlink that git-sym was tracking. Try

# After you are sure that you do not need any uncommitted files,
git reset --hard

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