Issues

• Does phastCons on windows of the MSA identify more conserved elements vs. phastCons on whole MSA?

  UCSantaCruzComputationalGenomicsLab/phast#6 · Filter by author sosie101 opened on Apr 24, 2025

• Is the bed file of PhastCons generated based on the values in the wig file？

  UCSantaCruzComputationalGenomicsLab/phast#5 · Filter by author helloworldABCD1234 opened on Jan 2, 2025

• The wig generated by phastcon does not match the corresponding bed，Do gaps and repetitive sequences in maf also receive ratings？

  UCSantaCruzComputationalGenomicsLab/phast#4 · Filter by author helloworldABCD1234 opened on Dec 3, 2024

• PhastCons generates a 0-1 score wig file. What is the conservative score? Do you have specific standards

  UCSantaCruzComputationalGenomicsLab/phast#3 · Filter by author helloworldABCD1234 opened on Dec 3, 2024

• option to over-ride same srcName error?

  UCSantaCruzComputationalGenomicsLab/phast#2 · Filter by author sorrywm opened on May 30, 2019