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Six models: Qwen3.8 and DeepSeek V4 Pro, Modal repeat, two grader fixes - #60
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…fixes - Results: six models on all 11 tasks; all scores now re-judged (PROVISIONAL.json removed). Qwen local, DeepSeek on Modal, plus a Qwen repeat on Modal in results/repeats/ with a local-vs-Modal timing comparison (scripts/compare_jobs.py). - Grader fixes found in DeepSeek's runs: the lint gate allows documented pipette settings (tip_racks, starting_tip, flow_rate.*, ...), and mixing a source well before drawing from it is no longer flagged as contamination. - colony-PCR-hard: instead of no plate check, a composition check the paper supports (every well gets all inputs, equal volumes, 10-25 uL). Adversarial suite: 0 holes. - Cost: non-Claude models priced from tokens at OpenRouter prices (prices.json); Claude Code's figure kept as claude_code_cost_usd. - README, preprint, report, figures and leaderboard updated. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
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Results (refused tasks not scored; ranked on the 8 tasks every model answered)
Every score is now judged by the final verifier with three votes, so
PROVISIONAL.jsonis gone. The one exception is Sonnet's AMPure trial, which has 2 votes that agree on every item.Local Docker vs Modal (Qwen, same model and grader)
The two Qwen runs differ by 0.08 in the mean, and four tasks changed score. That's single-attempt noise. Details are in
results/repeats/2026-10-07-qwen-modal/.Grader changes
p20.tip_racks = [...]etc.) are now allowed. Before, DeepSeek's correct a1-a12 protocol scored 0. Patching classes or modules is still refused, and a regression test covers it.not_from_paper = { pcr_plate = [10, 25] }replaces "no plate check". Every well must get master mix, primers and colony, all wells must be equal, and the reaction must be 10–25 µL. This closed 3 of the 4 adversarial holes the paper-only change had opened. The 4th, halved volumes, gives 9 + 0.5 + 0.5 = 10 µL, the paper's own reaction, so it is marked as a valid variant. Adversarial suite: 0 holes, 27/27 controls, max attack score 0.47. No model's score changed.🤖 Generated with Claude Code