Add A+ cohort - #23

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pletzer wants to merge 15 commits into

Commits on Jul 5, 2026

work in progress
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Commits on Jul 6, 2026

split checksums between A+ and normal
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need to implement A+ dynamics, currently pure accumulation. Check step_fishery_count, adding A+ back to the spawning biomass.
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+ init of A+, now A+ calls stepForward....
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Commits on Jul 8, 2026

Commits on Jul 15, 2026

minor adjustment
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Commits on Jul 16, 2026

Commits on Jul 27, 2026

Declare independent_variables x once per worker, not per task
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Commits on Jul 28, 2026

Move reset(x) out of InitializeCohort/InitializeAPlus into worker init
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