Skip to content

feat: add SEED-007 (Bombolitin II) + SEED-008 (Puroindoline-a) for novel scaffold diversity (#42) #41

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
cschanhniem merged 1 commit into from
Jun 28, 2026
Merged

feat: add SEED-007 (Bombolitin II) + SEED-008 (Puroindoline-a) for novel scaffold diversity (#42) #41

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 2 additions & 0 deletions examples/sequences/amp_seeds.csv
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -5,3 +5,5 @@ SEED-003,RRWQWRMKKLG,cationic_tryptophan_template
SEED-004,FLPLIGRVLSGIL,temporin_like_template
SEED-005,KRLFKKIGSALKFL,hybrid_cationic_hydrophobic
SEED-006,INWKGIAAMAKKLL,mastoparan_x_template
SEED-007,IKITTMLKKLG,bombolitin_ii_template
SEED-008,FPVTWRWWKWWKG,puroindoline_a_trp_domain
122 changes: 122 additions & 0 deletions examples/sequences/phase3_pool.csv
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -460,3 +460,125 @@ SEED-006_VAR_075,ITWKGVAAMAKKLL,template_mutation_from_SEED-006
SEED-006_VAR_076,LNWKGIAAMAKKLL,template_mutation_from_SEED-006
SEED-006_VAR_077,MNWKGIAAMAKKLL,template_mutation_from_SEED-006
SEED-006_VAR_078,VNWKGIAAMAKKLL,template_mutation_from_SEED-006
SEED-007_VAR_001,AKITTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_002,FKISTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_003,FKITTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_004,IHFTTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_005,IHITTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_006,IKATTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_007,IKFTTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_008,IKFTTMLKKLP,template_mutation_from_SEED-007
SEED-007_VAR_009,IKFTTMLRKLG,template_mutation_from_SEED-007
SEED-007_VAR_010,IKINTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_011,IKINTMLKKMG,template_mutation_from_SEED-007
SEED-007_VAR_012,IKINTMLRKLG,template_mutation_from_SEED-007
SEED-007_VAR_013,IKIQTMLHKLG,template_mutation_from_SEED-007
SEED-007_VAR_014,IKIQTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_015,IKIQTVLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_016,IKIRTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_017,IKISTMLKKAG,template_mutation_from_SEED-007
SEED-007_VAR_018,IKISTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_019,IKITKMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_020,IKITNMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_021,IKITNMVKKLG,template_mutation_from_SEED-007
SEED-007_VAR_022,IKITQMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_023,IKITSMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_024,IKITTALKKLG,template_mutation_from_SEED-007
SEED-007_VAR_025,IKITTFIKKLG,template_mutation_from_SEED-007
SEED-007_VAR_026,IKITTFLKHLG,template_mutation_from_SEED-007
SEED-007_VAR_027,IKITTFLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_028,IKITTILKKLG,template_mutation_from_SEED-007
SEED-007_VAR_029,IKITTLIKKLG,template_mutation_from_SEED-007
SEED-007_VAR_030,IKITTLLKKIG,template_mutation_from_SEED-007
SEED-007_VAR_031,IKITTLLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_032,IKITTMAKKLG,template_mutation_from_SEED-007
SEED-007_VAR_033,IKITTMAKKVG,template_mutation_from_SEED-007
SEED-007_VAR_034,IKITTMFKKLG,template_mutation_from_SEED-007
SEED-007_VAR_035,IKITTMIKKLG,template_mutation_from_SEED-007
SEED-007_VAR_036,IKITTMLHKLG,template_mutation_from_SEED-007
SEED-007_VAR_037,IKITTMLHKLP,template_mutation_from_SEED-007
SEED-007_VAR_038,IKITTMLKHIG,template_mutation_from_SEED-007
SEED-007_VAR_039,IKITTMLKHLG,template_mutation_from_SEED-007
SEED-007_VAR_040,IKITTMLKKAG,template_mutation_from_SEED-007
SEED-007_VAR_041,IKITTMLKKFG,template_mutation_from_SEED-007
SEED-007_VAR_042,IKITTMLKKIG,template_mutation_from_SEED-007
SEED-007_VAR_043,IKITTMLKKLP,template_mutation_from_SEED-007
SEED-007_VAR_044,IKITTMLKKMG,template_mutation_from_SEED-007
SEED-007_VAR_045,IKITTMLKKVG,template_mutation_from_SEED-007
SEED-007_VAR_046,IKITTMLKRLG,template_mutation_from_SEED-007
SEED-007_VAR_047,IKITTMLRKLG,template_mutation_from_SEED-007
SEED-007_VAR_048,IKITTMLRKLP,template_mutation_from_SEED-007
SEED-007_VAR_049,IKITTMLRKMG,template_mutation_from_SEED-007
SEED-007_VAR_050,IKITTMMKKLG,template_mutation_from_SEED-007
SEED-007_VAR_051,IKITTMVKKLG,template_mutation_from_SEED-007
SEED-007_VAR_052,IKITTVLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_053,IKITTVLKKLP,template_mutation_from_SEED-007
SEED-007_VAR_054,IKLTTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_055,IKMTTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_056,IKMTTMLKKLP,template_mutation_from_SEED-007
SEED-007_VAR_057,IKVTTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_058,IRINTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_059,IRITTMLHKLG,template_mutation_from_SEED-007
SEED-007_VAR_060,IRITTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_061,LKITTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_062,MKITTMIKKLG,template_mutation_from_SEED-007
SEED-007_VAR_063,MKITTMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_064,VKITQMLKKLG,template_mutation_from_SEED-007
SEED-007_VAR_065,VKITTMLKKLG,template_mutation_from_SEED-007
SEED-008_VAR_001,APVTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_002,FGFTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_003,FGVNWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_004,FGVTWRWFKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_005,FGVTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_006,FPATWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_007,FPFTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_008,FPFTWRWYKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_009,FPITWRWFKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_010,FPITWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_011,FPLTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_012,FPMTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_013,FPVNWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_014,FPVNWRWWKYWKG,template_mutation_from_SEED-008
SEED-008_VAR_015,FPVQWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_016,FPVQWRWWKWWRG,template_mutation_from_SEED-008
SEED-008_VAR_017,FPVRWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_018,FPVSWRWWKFWKG,template_mutation_from_SEED-008
SEED-008_VAR_019,FPVSWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_020,FPVTFRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_021,FPVTWHWFKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_022,FPVTWHWWKWFKG,template_mutation_from_SEED-008
SEED-008_VAR_023,FPVTWHWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_024,FPVTWHWYKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_025,FPVTWHYWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_026,FPVTWKWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_027,FPVTWKWWKWWKP,template_mutation_from_SEED-008
SEED-008_VAR_028,FPVTWKYWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_029,FPVTWRFWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_030,FPVTWRFWKWWRG,template_mutation_from_SEED-008
SEED-008_VAR_031,FPVTWRFWRWWKG,template_mutation_from_SEED-008
SEED-008_VAR_032,FPVTWRWFKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_033,FPVTWRWFKWWRG,template_mutation_from_SEED-008
SEED-008_VAR_034,FPVTWRWWHWWKG,template_mutation_from_SEED-008
SEED-008_VAR_035,FPVTWRWWKFWKG,template_mutation_from_SEED-008
SEED-008_VAR_036,FPVTWRWWKWFHG,template_mutation_from_SEED-008
SEED-008_VAR_037,FPVTWRWWKWFKG,template_mutation_from_SEED-008
SEED-008_VAR_038,FPVTWRWWKWWHG,template_mutation_from_SEED-008
SEED-008_VAR_039,FPVTWRWWKWWHP,template_mutation_from_SEED-008
SEED-008_VAR_040,FPVTWRWWKWWKP,template_mutation_from_SEED-008
SEED-008_VAR_041,FPVTWRWWKWWRG,template_mutation_from_SEED-008
SEED-008_VAR_042,FPVTWRWWKWYKG,template_mutation_from_SEED-008
SEED-008_VAR_043,FPVTWRWWKWYRG,template_mutation_from_SEED-008
SEED-008_VAR_044,FPVTWRWWKYWKG,template_mutation_from_SEED-008
SEED-008_VAR_045,FPVTWRWWRWWHG,template_mutation_from_SEED-008
SEED-008_VAR_046,FPVTWRWWRWWKG,template_mutation_from_SEED-008
SEED-008_VAR_047,FPVTWRWYKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_048,FPVTWRYWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_049,FPVTWRYWKYWKG,template_mutation_from_SEED-008
SEED-008_VAR_050,FPVTYRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_051,IPVSWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_052,IPVTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_053,LPVTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_054,MPVTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_055,MPVTWRYWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_056,VPVTWRWWKWWKG,template_mutation_from_SEED-008
SEED-008_VAR_057,VPVTWRWWKWWKP,template_mutation_from_SEED-008
Loading