Issues

• Update to NOAA-FIMS/.github spell check action

  status: triage_needed

  LowFilter by Priority: Low

  LowFilter by Effort: Low
  Task

  NOAA-FIMS/ecosystemom#46 · Filter by author kellijohnson-NOAA opened on Oct 6, 2026
  1

  

• align truth_type names with FIMS type names in input data

  status: triage_needed

  LowFilter by Priority: Low

  LowFilter by Effort: Low
  Task

  NOAA-FIMS/ecosystemom#45 · Filter by author kellijohnson-NOAA opened on Sep 2, 2026
  1

• Standardize Atlantis truth list into ecosystemom long format

  NOAA-FIMS/ecosystemom#39 · Filter by author Bai-Li-NOAA opened on Jun 29, 2026

• Add Atlantis loader entry point in load_model()

  Jul 6, 2026Filter by Start date: Jul 6, 2026
  Feature

  NOAA-FIMS/ecosystemom#38 · Filter by author Bai-Li-NOAA opened on Jun 29, 2026
  

• Implement Atlantis functional group parser

  status: in progress
  Feature

  NOAA-FIMS/ecosystemom#37 · Filter by author Bai-Li-NOAA opened on Jun 29, 2026
  

• Look into {calibrar}

  status: triage_needed
  Task

  NOAA-FIMS/ecosystemom#35 · Filter by author kellijohnson-NOAA opened on Jun 16, 2026
  1

• Update plotting code use {stockplotr}

  attribute: low hanging 🍎kind: refactor

  MediumFilter by Priority: Medium

  LowFilter by Effort: Low
  Task

  NOAA-FIMS/ecosystemom#24 · Filter by author Bai-Li-NOAA opened on Jun 1, 2026
  

• Expand load_diet_composition() to support Ecosim consumption files

  kind: feature
  Feature

  NOAA-FIMS/ecosystemom#23 · Filter by author Bai-Li-NOAA opened on May 26, 2026

• Clarify behavior for estimate_double_logistic_parameters(): should maximum value equal 1?

  kind: documentationkind: questionkind: test case
  Task

  NOAA-FIMS/ecosystemom#21 · Filter by author Bai-Li-NOAA opened on May 26, 2026

• Investigate convergence and scaling differences between Ecosim and FIMS

  kind: vignette
  NOAA-FIMS/ecosystemom#19 · Filter by author Bai-Li-NOAA opened on May 26, 2026
  2

• Create modular function to generate selectivity curves from ecosystem model maturity-at-age values by functional group

  status: in progress
  NOAA-FIMS/ecosystemom#14 · Filter by author Bai-Li-NOAA opened on Feb 9, 2026
  

• Create modular function to generate selectivity curves from ecosystem model F values by functional group

  status: in progress
  NOAA-FIMS/ecosystemom#13 · Filter by author Bai-Li-NOAA opened on Feb 2, 2026
  

• Need to advertise the packages

  NOAA-FIMS/ecosystemom#11 · Filter by author kellijohnson-NOAA opened on Sep 24, 2025
  1

• [Developer Issue]: Submit manuscript to JOSS

  kind: documentationkind: questionkind: vignettestatus: needs discussion
  Task

  NOAA-FIMS/ecosystemom#3 · Filter by author kellijohnson-NOAA opened on Jun 10, 2025
  

• Add source (url) to ewe_nwatlantic_base

  NOAA-FIMS/ecosystemom#16 · Filter by author kellijohnson-NOAA opened on Mar 31, 2025