Proposed HDF5 input format and draft implementation#224

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The9Cat wants to merge 53 commits into

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Commits on Jul 4, 2026

Added a development code-timing helper
Martin D. Weinberg
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Added bods2hdf5
Martin D. Weinberg
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Change the executable and source file name to hdf5bods
Martin D. Weinberg
committed
Added some OpenMP parallelism for a bit more throughput
Martin D. Weinberg
committed
Read exp-style hdf5 input files in Component
Martin D. Weinberg
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Give the user a hint if no conversion mode is specified
Martin D. Weinberg
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Potential fix for pull request finding

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Potential fix for pull request finding

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Potential fix for pull request finding

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Potential fix for pull request finding

The9Cat
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Potential fix for pull request finding

The9Cat
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Potential fix for pull request finding

The9Cat
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Potential fix for pull request finding

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Updates for automatic datatype detection
Martin D. Weinberg
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Remove unused mismatch flag in hdf5bods verification
Copilot
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Commits on Jul 5, 2026

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The9Cat
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Verify aux fields in hdf5bods roundtrip check
Copilot
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Use integer-safe aux-int diff in verify mode
Copilot
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White-space changes only for readability
Martin D. Weinberg
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Fix m-field comment to mass
Copilot
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Added compression filter selection for testing
Martin D. Weinberg
committed
Merge branch 'InitFromHDF5' of github.com:EXP-code/EXP into InitFromHDF5
Martin D. Weinberg
committed
Add optional HDF5 particle index support
Copilot
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Minor change to option documentation only
Martin D. Weinberg
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Added some Doxygen documentation to the Component header [no ci]
Martin D. Weinberg
committed
Merge branch 'InitFromHDF5' of github.com:EXP-code/EXP into InitFromHDF5
Martin D. Weinberg
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Looks like garbled merged; fix propsed
Martin D. Weinberg
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Commits on Jul 6, 2026

Move precision detection into the dataset reader function
Martin D. Weinberg
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docs: update Component.H to reflect per-dataset independent precision detection
Copilot
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Update header reader to read the whole line rather than use the file stream to make sure that any trailing white space is ignored
Martin D. Weinberg
committed
Merge branch 'InitFromHDF5' of github.com:EXP-code/EXP into InitFromHDF5
Martin D. Weinberg
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The9Cat
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Some previous reworking during review left these variable undefined
Martin D. Weinberg
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