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Merge master (v0.1.0) into develop - #3

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CiaranOMara merged 6 commits into
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back-merge/v0.1.0
Oct 19, 2026
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CiaranOMara merged 6 commits into
developfrom
back-merge/v0.1.0

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This brings master back into develop after the release or hotfix of v0.1.0, as gitflow does.
If it conflicts with develop, merge develop into back-merge/v0.1.0, resolve the conflicts there, and push.

Documenter pages for the package, the reference of the hand-written functions, and the command builders, with every subcommand's docstring.
The documentation is a project of the workspace, beside the tests.
The README links the stable and development documentation.
After BioJuliaTemplate.jl:
- unit tests on Julia 1.12, the latest release and nightly, on Linux, macOS and Windows, with Codecov coverage;
- the documentation, built on pull requests and deployed from `develop` and tags;
- Runic formatting;
- Dependabot for the compat of the workspace's projects and the versions of the actions.

The actions are pinned to commits, with their versions in comments, which Dependabot updates.
Issue and pull request templates, funding, and TagBot, which tags releases registered in the General registry.
The README's Contributing section points to BioJulia's contributing guidelines, semantic versioning and the changelog.
The Gitflow workflow calls the shared checks on pull requests into master and develop: the source branch, the version, the changelog and its comparison links, breaking changes, and the changelog entry.
The Back-merge workflow opens the pull request that brings master back into develop once a release or hotfix merges, with the ReleaseFlow app's credentials from the `releaseflow` environment.
Both name master as the main branch.

CODEOWNERS requires a maintainer's review of the workflows, and Dependabot labels its updates of the actions `skip changelog`.
The README's Contributing section and the pull request template describe the branching model.
The changelog's unreleased entries move into the section of 0.1.0, with the comparison links.
@CiaranOMara
CiaranOMara merged commit d6abc9b into develop Oct 19, 2026
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@CiaranOMara
CiaranOMara deleted the back-merge/v0.1.0 branch October 19, 2026 21:17

This branch was successfully deployed

1 active deployment
releaseflow — ac149ab9 Deployed Oct 19, 2026 by CiaranOMara via back-merge / Back-merge #1
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2 participants