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ro: mint the substance predicate family (0xA3..0xA5) #264

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Merged
AdaWorldAPI merged 1 commit into from
Aug 10, 2026
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ro: mint the substance predicate family (0xA3..0xA5) #264

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14 changes: 14 additions & 0 deletions crates/ogar-ro/src/lib.rs
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Original file line number Diff line number Diff line change
Expand Up @@ -177,6 +177,20 @@ relation_palette! {
0xA0 => HAS_QUALITY, "has_quality", "RO:0000086";
0xA1 => HAS_INTERPRETATION, "has_interpretation", "SCTID:363713009";
0xA2 => INTERPRETS, "interprets", "SCTID:363714003";
// ── 2026-08-10: the substance predicate family (operator-approved mints).
// A medication node needs THREE distinct predicate families that must
// never be folded into one "relates_to": what it treats, what it causes,
// and which measurements it distorts. `treats` is RO's substance-treatment
// term. `causes_adverse_effect` records provenance against RO's condition-
// causation term (RO's term is broader than "adverse"; the byte carries
// the narrowed clinical semantics, the CURIE the ancestry). `confounds_test`
// has NO public ontology term at predicate level — drug↔lab-test
// interference lives in interaction databases, not relation ontologies —
// so its provenance is honestly LOCAL until a real term is found; an
// invented-looking CURIE would be a lie wearing a namespace.
0xA3 => TREATS, "treats", "RO:0002606";
0xA4 => CAUSES_ADVERSE_EFFECT, "causes_adverse_effect", "RO:0003302";
0xA5 => CONFOUNDS_TEST, "confounds_test", "LOCAL:confounds_test";
}

/// The RO/BFO relation palette as an `ogar-loco` [`Vocabulary`].
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