From 992e76de4019c83e4daed6d246ceb778626430b6 Mon Sep 17 00:00:00 2001 From: Erick Navarro Date: Thu, 13 Aug 2026 17:21:01 -0700 Subject: [PATCH] List Illumina microarray manifests as dependencies --- README.Rmd | 1 - README.md | 1 - vignettes/RAMEN.Rmd | 1 - 3 files changed, 3 deletions(-) diff --git a/README.Rmd b/README.Rmd index c19f601..aef420d 100644 --- a/README.Rmd +++ b/README.Rmd @@ -65,7 +65,6 @@ You can install the latest version of RAMEN from # BiocManager::install("S4Vectors") # BiocManager::install("IRanges") # BiocManager::install("GenomicRanges") -## If using any of these Illumina microarrays, pick one: # BiocManager::install("IlluminaHumanMethylation450kanno.ilmn12.hg19") # BiocManager::install("IlluminaHumanMethylationEPICanno.ilm10b4.hg19") # BiocManager::install("IlluminaHumanMethylationEPICv2anno.20a1.hg38") diff --git a/README.md b/README.md index f6b8f40..ad9275b 100644 --- a/README.md +++ b/README.md @@ -59,7 +59,6 @@ You can install the latest version of RAMEN from # BiocManager::install("S4Vectors") # BiocManager::install("IRanges") # BiocManager::install("GenomicRanges") -## If using any of these Illumina microarrays, pick one: # BiocManager::install("IlluminaHumanMethylation450kanno.ilmn12.hg19") # BiocManager::install("IlluminaHumanMethylationEPICanno.ilm10b4.hg19") # BiocManager::install("IlluminaHumanMethylationEPICv2anno.20a1.hg38") diff --git a/vignettes/RAMEN.Rmd b/vignettes/RAMEN.Rmd index 107c017..6985618 100644 --- a/vignettes/RAMEN.Rmd +++ b/vignettes/RAMEN.Rmd @@ -334,7 +334,6 @@ available in the RAMEN package. # BiocManager::install("S4Vectors") # BiocManager::install("IRanges") # BiocManager::install("GenomicRanges") -## If using any of these Illumina microarrays, pick one: # BiocManager::install("IlluminaHumanMethylation450kanno.ilmn12.hg19") # BiocManager::install("IlluminaHumanMethylationEPICanno.ilm10b4.hg19") # BiocManager::install("IlluminaHumanMethylationEPICv2anno.20a1.hg38")