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refactor(metadata-protocol): move package install and update out of protocol.ts into protocol-package-install.ts (#25467 cut 7) #49697

Job	Run time
Lint · scoped · tooling self-tests	1m 1s
Lint · scoped · query-options erasure	3m 42s
Type Check · consumer gates	8m 52s
Lint · scoped · slot lookup & corpus	4m 19s
Lint · CI, release & engine gates	3m 51s
Lint · ESLint	2m 54s
Lint · repo & tooling gates	5m 22s
Type Check · workspace	12m 57s
Lint · PM dispatch-gates	1m 16s
Lint · docs & code guards	3m 38s
Type Check · source gates	3m 33s
Type Check · debt ledger	5m 44s
Lint & Repo Gates	3s
TypeScript Type Check	3s
	57m 15s