Issues

• [Bug]: non-integer Lbin_lo/Lbin_hi are silently truncated under Lbin_method = 1, while method 3 raises a fatal error for the equivalent mistake

  nmfs-ost/ss3-source-code#784 · Filter by author grantdadams opened on Sep 24, 2026
  

• need warning and improved logic for generalized sizecomp

  compositionin progress
  Feature

  nmfs-ost/ss3-source-code#751 · Filter by author Rick-Methot-NOAA opened on Feb 2, 2026 · 3.30.26
  1

  

• [Feature]: Add standard errors for area-specific quantities

  area & movement
  Feature

  nmfs-ost/ss3-source-code#731 · Filter by author e-perl-NOAA opened on Sep 16, 2025 · On deck
  3

  

• [Feature]: Create a basic report list that could serve as better starting configuration for customization

  misc. output
  nmfs-ost/ss3-source-code#723 · Filter by author Rick-Methot-NOAA opened on Sep 9, 2025 · On deck
  

• [Feature]: restrict biology output using the use_morph(g) flag

  biologymisc. outputongoing
  nmfs-ost/ss3-source-code#702 · Filter by author Rick-Methot-NOAA opened on Aug 18, 2025 · On deck
  

• [Feature]: mean vs median recruitment when using SCAA option

  recruitment
  nmfs-ost/ss3-source-code#696 · Filter by author Rick-Methot-NOAA opened on Jul 31, 2025 · 3.30.26
  

• [Feature]: dedicated option for timesteps as continuous seasons

  misc. inputrecruitmentwishlist
  Feature

  nmfs-ost/ss3-source-code#660 · Filter by author Rick-Methot-NOAA opened on Mar 17, 2025 · On deck
  

• [Feature]: Implement calculation of effective degrees of freedom

  in progressnew requeststatisticswishlist
  Feature

  nmfs-ost/ss3-source-code#651 · Filter by author Rick-Methot-NOAA opened on Jan 13, 2025 · 3.30.26
  13

  

• [Refactor]: bio_yr and bio_t_base are little used and should be replaceable

  misc. internal calcquick
  nmfs-ost/ss3-source-code#626 · Filter by author Rick-Methot-NOAA opened on Oct 4, 2024 · ideas - no action
  

• [Feature]: Cohort growth deviation added to Linf (or L2)

  EPIC:GROWTH_M25growthwishlist
  nmfs-ost/ss3-source-code#599 · Filter by author peterkuriyama-NOAA opened on May 14, 2024 · On deck
  1

  

• [Bug]: "inf" value in bootstrap of mean size-at-age data for ages with sample size 0

  bugmisc. outputquick
  nmfs-ost/ss3-source-code#598 · Filter by author iantaylor-NOAA opened on May 2, 2024 · 3.30.26
  

• [Feature]: Mean recruitment adjustment

  benchmark - MSYin progressrecruitment
  nmfs-ost/ss3-source-code#594 · Filter by author Rick-Methot-NOAA opened on Apr 26, 2024 · 3.30.26
  17

  

• [Feature]: Revise recdev_bias adjustment to be a customizable list of line segments

  recruitment
  nmfs-ost/ss3-source-code#588 · Filter by author Rick-Methot-NOAA opened on Apr 17, 2024 · On deck
  

• [Refactor]: create function for t=f(y,s)

  misc. internal calcquick
  nmfs-ost/ss3-source-code#578 · Filter by author Rick-Methot-NOAA opened on Mar 11, 2024 · On deck
  

• [Feature]: add discard body weights to wtatage.ss

  discard & retentionduplicatewishlist
  nmfs-ost/ss3-source-code#575 · Filter by author Rick-Methot-NOAA opened on Feb 27, 2024 · On deck
  1

  

• [Refactor]: DM for age discard

  discard & retention
  nmfs-ost/ss3-source-code#573 · Filter by author Rick-Methot-NOAA opened on Feb 22, 2024 · On deck
  

• [Bug]: crash when do_recdev = 0 is combined with SRR option 7 (but work-around is available)

  recruitment
  nmfs-ost/ss3-source-code#560 · Filter by author iantaylor-NOAA opened on Feb 1, 2024 · On deck
  

• [Feature]: Apply the depletion survey (option 34) with an initial year that is not unfished

  nmfs-ost/ss3-source-code#529 · Filter by author shcaba opened on Nov 14, 2023 · 3.30.27
  5

  

• [Feature]: update dynamic Bzero to work with recdev options 3&4

  misc. internal calcrecruitment
  nmfs-ost/ss3-source-code#507 · Filter by author Rick-Methot-NOAA opened on Sep 26, 2023 · On deck
  

• [Feature]: add option to input matrix of M by year & age

  natural mortalitywishlist
  nmfs-ost/ss3-source-code#503 · Filter by author iantaylor-NOAA opened on Sep 19, 2023 · On deck
  

• [Feature]: Add generalized gamma index likelihood

  statisticssurvey_&_Qwishlist
  nmfs-ost/ss3-source-code#497 · Filter by author Cole-Monnahan-NOAA opened on Aug 18, 2023 · 3.30.26
  16

  

• [Feature]: Add capability for seasonal offset in a CPUE catchability

  duplicatenew requestsurvey_&_Qtime-vary parmwishlist
  nmfs-ost/ss3-source-code#481 · Filter by author Rick-Methot-NOAA opened on Jul 21, 2023 · 3.30.27
  

• [Feature]: Add age range option to 2DAR selectivity

  new requestselectivity
  nmfs-ost/ss3-source-code#461 · Filter by author Rick-Methot-NOAA opened on Jun 2, 2023 · 3.30.26
  

• [Feature]: Option to omit age_error definitions

  compositionnew requestquick
  nmfs-ost/ss3-source-code#459 · Filter by author Rick-Methot-NOAA opened on Jun 1, 2023 · 3.30.26
  

• [Feature]: add suggestion to warning files for F_method 2 or 3 to nudge users towards F_method 4

  fishing mortalitynew requestquickwarnings
  nmfs-ost/ss3-source-code#445 · Filter by author iantaylor-NOAA opened on May 18, 2023 · 3.30.26