### Breaking changes introduced by the update that need handling: - `SAMTOOLS_STATS` / `SAMTOOLS_SORT`: reference input changed from `[meta, fasta]` → `[meta, fasta, fai]` (2 → 3 elements) - `*_MARKDUPLICATES_PICARD`: input arity changed (3 → 2) - `GFFREAD`: input changed (1 → 2)
Breaking changes introduced by the update that need handling:
SAMTOOLS_STATS/SAMTOOLS_SORT: reference input changed from[meta, fasta]→[meta, fasta, fai](2 → 3 elements)*_MARKDUPLICATES_PICARD: input arity changed (3 → 2)GFFREAD: input changed (1 → 2)