From 3214f25192e1bb084c4f6a4524db615de3f12180 Mon Sep 17 00:00:00 2001
From: Ali Khan <alik@robarts.ca>
Date: Mon, 22 Jun 2026 09:49:17 -0400
Subject: [PATCH] make chunks (1x256x256x256) the default

since downstream segmentation post-processing works best with thesee
chunks (128 ends up with too large a task graph it seems)..
---
 spimquant/config/snakebids.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/spimquant/config/snakebids.yml b/spimquant/config/snakebids.yml
index 1d08a15..f97d7f2 100644
--- a/spimquant/config/snakebids.yml
+++ b/spimquant/config/snakebids.yml
@@ -245,9 +245,9 @@ parse_args:
     help: "Chunk size (c, x, y, z) for intermediate OME-Zarr stores (default: %(default)s)"
     default:
       - 1
-      - 128
-      - 128
-      - 128
+      - 256
+      - 256
+      - 256
     nargs: 4
     type: int
     dest: zarr_store_chunks