diff --git a/test/doi/fixtures.jl b/test/doi/fixtures.jl index 594c0f83..e4b0f45d 100644 --- a/test/doi/fixtures.jl +++ b/test/doi/fixtures.jl @@ -31,7 +31,7 @@ function bundle_fixture(root; result=false, mock=false, dangerous=false) "method" => "nb_glm", "provenance" => Dict("mock" => mock), "results" => Dict("synthetic_fixture" => Dict("status" => "fixture"))))) end - B.write_checksums!(dir) + Target.DOIBundles.write_checksums!(dir) return dir end @@ -102,13 +102,13 @@ function prepared_fixture(f; result=false, dangerous=false, environment="sandbox root = joinpath(tmp, "publications") fake = FakeZenodo(; environment) c = client(fake) - prepared = P.prepare!(root, source, metadata_fixture(), c) + prepared = Target.DOIPublications.prepare!(root, source, metadata_fixture(), c) f(tmp, root, source, fake, c, prepared) end end function publish_fixture(root, prepared, c) - P.publish!(root, prepared["id"], c; confirmation=prepared["confirmation_phrase"], + Target.DOIPublications.publish!(root, prepared["id"], c; confirmation=prepared["confirmation_phrase"], bundle_sha256=prepared["bundle_sha256"], acknowledge_public=true) end diff --git a/test/unit/test_zero_replacement.jl b/test/unit/test_zero_replacement.jl index d4a53d1e..9c30803a 100644 --- a/test/unit/test_zero_replacement.jl +++ b/test/unit/test_zero_replacement.jl @@ -212,7 +212,7 @@ vector(vals)::Vector{Float64} = Float64[Float64(v) for v in vals] write.table(r, stdout(), sep = ",", row.names = FALSE, col.names = FALSE) """ r_out = read(`$rscript -e $script`, String) - rows = [Float64.(parse.(Float64, split(l, ","))) for l in + rows = [parse.(Float64, split(l, ",")) for l in split(strip(r_out), "\n") if !isempty(strip(l))] reference = permutedims(Matrix{Float64}(hcat(rows...)), (1, 1)) ours = multiplicative_replacement(counts; delta = Float64(mr.delta))