Merge remote-tracking branch 'origin/master'

Author: goedman

.github/workflows/CI.yml

@@ -7,7 +7,7 @@ on:
   pull_request:
 
 env:
-  JULIA_CMDSTAN_HOME: "/home/worker/cmdstan-2.28.2/"
+  JULIA_CMDSTAN_HOME: "/home/worker/cmdstan-2.31.0/"
 
 jobs:
   test:
@@ -41,18 +41,18 @@ jobs:
           OLDWD=`pwd`
           cd ~
           pwd
-          wget https://github.com/stan-dev/cmdstan/releases/download/v2.28.2/cmdstan-2.28.2.tar.gz
-          tar -xzpf cmdstan-2.28.2.tar.gz
+          wget https://github.com/stan-dev/cmdstan/releases/download/v2.31.0/cmdstan-2.31.0.tar.gz
+          tar -xzpf cmdstan-2.31.0.tar.gz
           ls -lia .
-          ls -lia ./cmdstan-2.28.2
-          ls -lia ./cmdstan-2.28.2/make
-          touch ./cmdstan-2.28.2/make/local
-          echo "STAN_THREADS=true" > ./cmdstan-2.28.2/make/local
-          cat ./cmdstan-2.28.2/make/local
+          ls -lia ./cmdstan-2.31.0
+          ls -lia ./cmdstan-2.31.0/make
+          touch ./cmdstan-2.31.0/make/local
+          echo "STAN_THREADS=true" > ./cmdstan-2.31.0/make/local
+          cat ./cmdstan-2.31.0/make/local
           make -C $JULIA_CMDSTAN_HOME build
           cd $OLDWD
         env:
-          JULIA_CMDSTAN_HOME: "/home/runner/cmdstan-2.28.2/"
+          JULIA_CMDSTAN_HOME: "/home/runner/cmdstan-2.31.0/"
       - uses: actions/checkout@v2
       - uses: julia-actions/setup-julia@v1
         with:
@@ -71,7 +71,7 @@ jobs:
       - uses: julia-actions/julia-buildpkg@latest
       - uses: julia-actions/julia-runtest@latest
         env:
-          JULIA_CMDSTAN_HOME: "/home/runner/cmdstan-2.28.2/"
+          JULIA_CMDSTAN_HOME: "/home/runner/cmdstan-2.31.0/"
       - uses: julia-actions/julia-processcoverage@v1
         if: matrix.version == '1' && matrix.os == 'ubuntu-latest' && matrix.num_threads == 1
       - uses: codecov/codecov-action@v1

Project.toml

@@ -10,19 +10,24 @@ Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
 JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
 Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
-StanSample = "c1514b29-d3a0-5178-b312-660c88baa699"
+#StanSample = "c1514b29-d3a0-5178-b312-660c88baa699"
 Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 StatsFuns = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
 #StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd"
-StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd"
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 
 [compat]
 CSV = "0.10"
 DataFrames = "1.4"
 Distributions = "0.25"
 JSON = "0.21"
-StanSample = "6, 7"
+#StanSample = "7"
 StatsFuns = "1.0"
-StatsPlots = "0.15"
 julia = "1"
+
+[extras]
+StanSample = "c1514b29-d3a0-5178-b312-660c88baa699"
+Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
+
+[targets]
+test = ["StanSample", "Test"]