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missing_values.md

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Missing-value reporting

Do not leave required metadata fields blank. If a value is absent, report why it is absent using a repository-approved missing-value term.

Repository-specific rules take priority. For INSDC submissions, use INSDC-accepted missing-value reporting terms where applicable.

Phrase Reason for use When does it apply INSDC token DataCite code ISO/GML (nilReason) Definition
not applicable;
not relevant
Field is outside the scope of the experiment Depth for human stool sample not applicable
for a control missing: control sample
:unap inapplicable Information is inappropriate to report; sometimes shows a gap in the standard itself.
not available Value exists somewhere, but you cannot obtain it Host BMI missing from a 1990 gut study Top level: missing
or: missing: third party data
:unav missing Information of an expected format was not given because it is unavailable or unretrievable, with no expectation of later supply.
not recorded Measurement was never captured Ambient temperature not recorded during environmental swabbing missing: not collected
missing: lab stock
:unav missing Information was expected but never collected at source.
not provided Value exists but is under embargo / pending Exact collection date withheld until publication of the clinical trial not provided :tba template
or other:pending
Information of an expected format was not given now, but will be supplied later.
restricted access Value exists but must remain confidential Coordinates of endangered species or patient postcode that could be used to identify individual restricted access :unal
or :unac if the restriction is temporary
withheld Information exists but cannot be released openly because of privacy, conservation or legal constraints.

Sources:
INSDC Missing Value Reporting Terms;
DataCite - Appendix 3: Standard values for unknown information;
ISO 19115-3

Practical rule

Use the most specific explanation available. not collected and restricted access mean different things and should not be collapsed into a generic NA.