diff --git a/README.md b/README.md index 38d52e1..a9f33cb 100644 --- a/README.md +++ b/README.md @@ -66,7 +66,7 @@ In this repository you will find useful resources related to the HIVE platfrom. * Command line input: `python quote_csv.py -f input.csv -o output.csv` * Input file: any csv file. -## 14.[vcf_reformatter.py](https://github.com/GW-HIVE/scripts/blob/main/python/VCFReformatter.py) +## 14.[vcf_reformatter.py](https://github.com/GW-HIVE/scripts/blob/main/python/vcf_reformatter.py) * Function: This script will convert a VCF file generated by HIVE Heptagon into the [VCF standard](https://samtools.github.io/hts-specs/VCFv4.2.pdf) (PDF) to be compatible with other applications. Uses [csv](https://github.com/python/cpython/blob/3.9/Lib/csv.py) and [re](https://github.com/python/cpython/blob/3.9/Lib/re.py) modules. * Command line input: NA (written in an IDE, so input file is hard coded (on line 29). Would have to be rewritten for command line args if meant to be executed at CLI). * Intput file: a .vcf file generated by HIVE Heptagon.